- A letter concerning the due boundaries of Christian fellowship; specially, with whom 'tis lawful to join in divine worship, and from whom 'tis duty to ... for conscience, in Dunnottar-Castle, 1685
- A Hind Let Loose: or An Historical Representation of the Testimonies of the Church of Scotland for the Interest of Christ, with the True State thereof in All its Periods
- A Hind Let Loose Or, An Historical Representation of the Testimonies
- A Hind Let Loose; or, an Historical Representation of the Testimonies of the Church of Scotland, for the Interest of Christ by Mr Alexander Shie
- Biographia Presbyteriana, Volume 2